Insertion junction: CLIP2.016566_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.016566
Chromosome:chromosome 1
Location:233105
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g001450 Predicted protein; (1 of 29) PF00612 - IQ calmodulin-binding motif (IQ) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGACCATTCAGGCGGCACAACGGGGCAGGGTGGCGAGGAAGCAGGTGGCT
Internal bar code:TTCTCTTATACTTAGGAAAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1592
LEAP-Seq percent confirming:89.7436
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:ATAGTCATCCAAGCGAGCCG
Suggested primer 2:TACCAGGATCCCGAGTCGTT