Insertion junction: CLIP2.016579_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.016579
Chromosome:chromosome 13
Location:3821491
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g589200 (1 of 21) IPR011016 - Zinc finger, RING-CH-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCGAAACCTTGAACACAGGGAGGAGAAGACGTGCCGCTTCTGCCAAGA
Internal bar code:ACTTAGTGACGCACATCTTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1065
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TCACTCTTGCCACTTCCACC
Suggested primer 2:GGCGAGATGGCAGCTCTATT