Insertion junction: CLIP2.016582_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.016582
Chromosome:chromosome 7
Location:2400485
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g328700 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAGGTGAGGCCGGGCTGGGTACAGCCGACTGAGTGCGCGGTCCGGCAC
Internal bar code:ACTAGGCACCCTCAGCATTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2060
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCGTGACCTTATTGCAGG
Suggested primer 2:TCATCTCCGATGCGTTCTCG