Insertion junction: CLIP2.016583_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.016583
Chromosome:chromosome 2
Location:1752172
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00056062

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTACCTCTATGGGGGTGGCGGTGGCGGCGCCAGCGCCGGTGCAGGGGC
Internal bar code:GGAGGCCCTCCGGGTTTTCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2395
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTCCTATGCGTACCTGGC
Suggested primer 2:GTGCAACAAACTGGACGGTC