Insertion junction: CLIP2.016587_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.016587
Chromosome:chromosome 3
Location:8618322
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g210401 (1 of 1) PTHR14614//PTHR14614:SF15 - HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCGCTGGTCGTAGTCGAGCTCACCTATAGGCAAAAGTGGAAGCATGGG
Internal bar code:ACATCCAAGCGCCTATTACAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1052
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GGACTGTGTTGCTGACCGTA
Suggested primer 2:GGTGAAGAGGCGGATGGAAA