Insertion junction: CLIP2.016587_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.016587
Chromosome:chromosome 3
Location:8618335
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g210401 (1 of 1) PTHR14614//PTHR14614:SF15 - HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGGCGTGCTGGGTAAACGTTGTTTAGCGCGCCCAGGGTGCGGAGCATG
Internal bar code:GGATTTCCGTAGTTCCGCGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2522
LEAP-Seq percent confirming:96.9697
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGAAGAGGCGGATGGAAA
Suggested primer 2:GGACTGTGTTGCTGACCGTA