Insertion junction: CLIP2.016591_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.016591
Chromosome:chromosome 7
Location:1030834
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g319650 FXL4,FXL5 FixL-like PAS domain protein; (1 of 3) IPR000014//IPR013767 - PAS domain // PAS fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGTTTATTCCAAACGCAACAACAAGGGGTTACTTGGGGTGCATGTGTGG
Internal bar code:TCGTGATAGACTGTACTCAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3192
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:130
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:130

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCTGGAACACGCTCTCAT
Suggested primer 2:TGTAGGCCTGCAAGTCCATG