Insertion junction: CLIP2.016592_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.016592
Chromosome:chromosome 5
Location:320853
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g800515 (1 of 4) IPR000595//IPR003938//IPR005821//IPR018490 - Cyclic nucleotide-binding domain // Potassium channel, voltage-dependent, EAG/ELK/ERG // Ion transport domain // Cyclic nucleotide-binding-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGATAGATTGAGCAAGCAGCGGCTCCCCCAGCCCAAATCCTCACCCCTC
Internal bar code:GCTGCGTACTATTTCTTCAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:369
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCATACGACTGGCGAGAC
Suggested primer 2:GTTTGGTCTTTGGACGGTGC