Insertion junction: CLIP2.016594_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.016594
Chromosome:chromosome 7
Location:1768622
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325722 (1 of 1) PTHR13215:SF0 - SUB1 HOMOLOG (S. CEREVISIAE); RNA polymerase coactivator intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACATACAGATACACACACACACACGCGCAACGTTTTCCTTGTGCTCTTT
Internal bar code:CTCAAAGCGTGATATCTCGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1001
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGCAAACCGCAAGAATC
Suggested primer 2:CAAACGCGACATGGGCTATG