Insertion junction: CLIP2.016600_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.016600
Chromosome:chromosome 8
Location:2996358
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g374950 (1 of 6) PF02582 - Uncharacterised ACR, YagE family COG1723 (DUF155) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGCCCCCTCCGGACCCAGCGACATGAGCGGCGTCGCGCCCGCCGTTG
Internal bar code:GCGATCCACATTTAACATGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2357
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGGCCCGCATTATCATCC
Suggested primer 2:CTGCCTTCATGTAATGCCGC