Insertion junction: CLIP2.016602_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.016602
Chromosome:chromosome 2
Location:2097998
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g089050 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCTCCATCATGAGCTGCGCCGCCGTTCTGGGCCGGCTGCCCGCAAGGC
Internal bar code:TTAACTGGTCATTAGCGCCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1156
LEAP-Seq percent confirming:63.6364
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTGCAGGCAGACACCAAC
Suggested primer 2:CGGTGGCGAGCATTAACATG