Insertion junction: CLIP2.016623_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.016623
Chromosome:chromosome 17
Location:1143616
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802033 3'UTR
Cre17.g802034 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAAAACCCAGGCCTGGCGGCAGCGCTGCACTGCCGGATGTGCTCGCGG
Internal bar code:TTTAGTGCTGTGTCGTCGAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2954
LEAP-Seq percent confirming:98.2143
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCTCCACTACGCGTCTAC
Suggested primer 2:CCACCGACCTTTCACTCCTC