Insertion junction: CLIP2.016626_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.016626
Chromosome:chromosome 6
Location:6831181
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g296400 (1 of 1) 1.3.8.4 - Isovaleryl-CoA dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAATGTGTGGGTTGCGTCTTCTGCTGAGTGTGCGGCTGGCGCGCCACA
Internal bar code:AAGAGGGGTATTGGGCAGACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1749
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTTTCTCCTGCTGCTGCT
Suggested primer 2:TCAGTTGATCCACCCTTGCC