Insertion junction: CLIP2.016627_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.016627
Chromosome:chromosome 4
Location:3963118
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g231516 (1 of 1) PTHR23315//PTHR23315:SF84 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // ANKYRIN AND ARMADILLO REPEAT-CONTAINING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCCATAACCCCTACCCCTCCACTACCCGCCACTACCCGCCACACACCC
Internal bar code:TGTCCGGACTTGCGGTACGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:448
LEAP-Seq percent confirming:27.7778
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCACCTCAACCAATCTCC
Suggested primer 2:GTGTGTGTGTGTGTGACGTG