Insertion junction: CLIP2.016638_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.016638
Chromosome:chromosome 3
Location:1290169
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g150151 NRT2E Nitrate/nitrite transporter; (1 of 5) PTHR23515:SF2 - HIGH AFFINITY NITRATE TRANSPORTER 2.3-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGCGGGTCGGGTTCGTGTGCACGGGTGAGGCGGGCAGGATGGCAAATA
Internal bar code:GCGGATGCTAAAACTTATTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2870
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAATTGCACACTGCTGGC
Suggested primer 2:TTACCTCCTCGACAGCTCCA