Insertion junction: CLIP2.016645_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.016645
Chromosome:chromosome 16
Location:5221118
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684500 TNP43,CSB62 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon); {"Probable transposon-derived protein of Chlamydomonas-Specific family B intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGAATCGGCCCCGCTTCTGGCGCCGCCGCCGCGCTGTCCTGGCTCGCG
Internal bar code:CGATTTGGTTGACTTATGCAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3780
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCACGTAACGCACACAA
Suggested primer 2:TCGTTGCAGACTTTGACCGA