Insertion junction: CLIP2.016662_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.016662
Chromosome:chromosome 11
Location:222790
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467554 (1 of 15) PF01694 - Rhomboid family (Rhomboid) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGTGAGAGCCGCCCCGCTGGCAGGGGTGTTTGCCCGGAGCTTGCAGCT
Internal bar code:GGCCGTTTCACCTTTTTCTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:574
LEAP-Seq percent confirming:73.6842
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGGAGTGGGGAGGTGGAT
Suggested primer 2:CCTGATAACGACGACCGGAG