Insertion junction: CLIP2.016668_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.016668
Chromosome:chromosome 12
Location:2077342
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g510300 UBC21 E2 Ubiquitin conjugating enzyme; (1 of 1) PF00179//PF10408 - Ubiquitin-conjugating enzyme (UQ_con) // Ubiquitin elongating factor core (Ufd2P_core) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCCCCACTACAGCGCATCCCTCCACGTACCCAGCCCGCTCCCCGTGCG
Internal bar code:TAAAGCCTCTCCGCTCCTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1116
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTTTCCCACTGTCGCACC
Suggested primer 2:GAGAGGGTGATGTGGTGGTG