Insertion junction: CLIP2.016673_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.016673
Chromosome:chromosome 11
Location:3820942
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g479383 (1 of 1) IPR000104//IPR013122 - Antifreeze protein, type I // Polycystin cation channel, PKD1/PKD2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGGTGAGGCGAGAGTACCGGTGCGGTGTCAAGTCTGGTGACTGGCATG
Internal bar code:ACGGAATGGACCTCCCTTAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3954
LEAP-Seq percent confirming:77.6316
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTCCGCTTCCCTACAACT
Suggested primer 2:GTAGGTGGAAGGGTCAGTGC