Insertion junction: CLIP2.016677_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.016677
Chromosome:chromosome 1
Location:3075811
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g019500 (1 of 2) PTHR22847//PTHR22847:SF431 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGAAGCGGCAGCAGCGGCGGTGAGGGGGCGCGGCAGGTTGGAGGGGCG
Internal bar code:GTGTTTATGCAGAGATACTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1033
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GGCATGGTGTTGGTGTTGAC
Suggested primer 2:TGGACCTAGCTTCGTTGCAG