Insertion junction: CLIP2.016678_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.016678
Chromosome:chromosome 1
Location:7886097
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g055440 CSR8 Carbohydrate sulfotransferase-related 8; (1 of 1) 2.8.2.30 - [Heparan sulfate]-glucosamine 3-sulfotransferase 3 / Heparan sulfate D-glucosaminyl 3-O-sulfotransferase 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAACTGCTGTACACGTGTGGTAGGCTTGCATTGCCACGCACGTCTTTTG
Internal bar code:ACGCCCCCCTGGAAGGAGAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2047
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:ATTCGTACGTTTGCGGCATG
Suggested primer 2:GACTCCTCAAGTGGGTCACG