Insertion junction: CLIP2.016682_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.016682
Chromosome:chromosome 6
Location:3233798
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g276900 HTB24,HTB1 (1 of 27) K11252 - histone H2B (H2B); Histone H2B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGCGGGAGGTCACAGTGGGCTTCTTGTTGTAGCGACTCAGCTTGGAGG
Internal bar code:AAACCGGCGAGAATTTGGTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2962
LEAP-Seq percent confirming:68.75
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGGGTCAAACAACCGCTC
Suggested primer 2:CCACCTACCTACGTCCTCCA