Insertion junction: CLIP2.016683_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.016683
Chromosome:chromosome 12
Location:6314978
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g536850 (1 of 3) IPR000182//IPR011011//IPR016181 - GNAT domain // Zinc finger, FYVE/PHD-type // Acyl-CoA N-acyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATTCACGGCACACTTTATTGCCCCCTTCCCCTCCCCATCCGGCCATCCG
Internal bar code:GCGCTTACAGGAAGAGTAACCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1248
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CAATGTCCTCCTTGTGCCCT
Suggested primer 2:CGGAGGAGCAGCAGAATGAA