Insertion junction: CLIP2.016685_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.016685
Chromosome:chromosome 13
Location:931402
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g568025 (1 of 1) PF08991 - Mature-T-Cell Proliferation I type (MTCP1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAACAGGCTACCACCCCAGCCGCATCTGCAGCCGCATCCTCCGAATCCC
Internal bar code:GACCGTATACGTGGAATTGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:4185
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCGCGCATAGTACCGGTA
Suggested primer 2:AACGGAAAGGCTAGAAGGGC