Insertion junction: CLIP2.016698_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.016698
Chromosome:chromosome 12
Location:4626269
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g522050 (1 of 1) PTHR11851//PTHR11851:SF140 - METALLOPROTEASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAAGGCAGGGTGGCGTGGGAGGTCAGAGGGTGTTGATTATTGGCCGTGC
Internal bar code:ATCCGTAATTGATCCCCTGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:594
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGCCACACATTCACACCA
Suggested primer 2:AGTCACACACCAACAGCACA