Insertion junction: CLIP2.016701_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.016701
Chromosome:chromosome 10
Location:4949353
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g454000 (1 of 2) IPR000157//IPR016024 - Toll/interleukin-1 receptor homology (TIR) domain // Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCGGCAGCGTGCCCGCGCGTTGCGCTTTCTGTGCTGCTGACGCGCCTC
Internal bar code:TGACCTCATAAGAATAGCGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:759
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGAAGACGTCGTAGAGCG
Suggested primer 2:GGGGTGGTAGTGCTCATTCC