Insertion junction: CLIP2.016710_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.016710
Chromosome:chromosome 12
Location:2463358
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g507500 (1 of 5) IPR001005//IPR009057//IPR017877 - SANT/Myb domain // Homeodomain-like // Myb-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGGGGGAGCGCCGCGGCACCTGCCGCAGAAAGCCGGCGGGCGCGGGAG
Internal bar code:GACATCACGACCTGGGGTTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2591
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:CGAACACCATCGAAGGGACA
Suggested primer 2:GTGTTGATGGCTGGGAGGAA