Insertion junction: CLIP2.016715_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.016715
Chromosome:chromosome 12
Location:8217753
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g551700 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCCGATTGCGTAAGCCACACTGTCGTCGTCCAGGATCGAACTGGAGAC
Internal bar code:AGCGAGAAGACAACCACTCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3238
LEAP-Seq percent confirming:94.898
LEAP-Seq n confirming:93
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:98

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAACTACACCACGACGAC
Suggested primer 2:TCGGATGTGTATCTGCTGGC