Insertion junction: CLIP2.016723_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.016723
Chromosome:chromosome 15
Location:321175
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g635250 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTATATGAACTTTGCGGAGGACGTGGGCAGCAGCGGACGCCTGGGCGCA
Internal bar code:TTAGTGAATAATGGACGTATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3231
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:CGTATCTGGGACTGACAGGC
Suggested primer 2:GCGTCGACCATCAACGATTG