Insertion junction: CLIP2.016753_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.016753
Chromosome:chromosome 17
Location:2623478
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g716600 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase 3'UTR/CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCATCGGGCGCTGGCGCCGAAGCAAGTGGAGCTGGCTGCTGTGCGGCGG
Internal bar code:CGGGACTGCTTGGGGAAAGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1311
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CAACAGTCAACAGCCACGTG
Suggested primer 2:GCATGCCTACAACAAACGCA