Insertion junction: CLIP2.016753_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.016753
Chromosome:chromosome 17
Location:2623481
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g716600 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase 3'UTR/CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACTGCAGGCCGCCGAGCATGCGCGCCGCGGGGCGACCGCGCTGTGTGA
Internal bar code:CGGGACTGCTTGGGGAAAGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1475
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGCCTACAACAAACGCA
Suggested primer 2:CAACAGTCAACAGCCACGTG