Insertion junction: CLIP2.016757_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.016757
Chromosome:chromosome 2
Location:1766722
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g086500 PGM10 (1 of 2) PTHR23029//PTHR23029:SF24 - PHOSPHOGLYCERATE MUTASE // SUBFAMILY NOT NAMED; Phosphoglycerate mutase intron
Cre02.g086550 CGL122 (1 of 4) K06941 - 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] (rlmN); predicted Fe-S-cluster redox enzyme 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAACTAACAGGTTTCTGCAGGCACACGATGCAAACCCCAATCGCCCTC
Internal bar code:AGCCGTCACAAGCGGGAAAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5518
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCAGGACGGACACAGAAG
Suggested primer 2:ACAGCACTGTGTCGTACCTG