Insertion junction: CLIP2.016764_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.016764
Chromosome:chromosome 10
Location:5745047
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g459700 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGTTGTAGCGCGCCCAGGGCGCGGCGCATACAATGCATATGGGTGCCA
Internal bar code:ATTTTAATATCGCACGAAAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:408
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CAGAATAGCGACGCCCTGAT
Suggested primer 2:CTGAAGCCGTGTCGCAAAAA