Insertion junction: CLIP2.016776_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.016776
Chromosome:chromosome 7
Location:3821055
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre07.g338602 POLH1 (1 of 1) PTHR11076//PTHR11076:SF11 - DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER // DNA POLYMERASE ETA; DNA polymerase eta subunit intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCACACGGGGAACACGCCTGGTTCCGGGCGGGGTCGAAACCCAAGAT
Internal bar code:GGCAATTTAATCAGCACATTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:876
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTGTATGCATTTCCACCG
Suggested primer 2:TGTGTGTGTGTGTGTGACGA