Insertion junction: CLIP2.016792_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.016792
Chromosome:chromosome 6
Location:346598
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g251250 HIK3,HKR3,HIK (1 of 1) PF00072//PF00512//PF02518 - Response regulator receiver domain (Response_reg) // His Kinase A (phospho-acceptor) domain (HisKA) // Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c); Histidine kinase response regulator of two-component system CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTGCGGAGGGCGGGATGGGGTTGCTGGGGCCAAAAGCCAGGTGCGTTG
Internal bar code:TGCGGATTTCGATGAATATAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1363
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGTCGTTGCGTCCTAGGT
Suggested primer 2:TTACGCATCGTTGGCAGACT