Insertion junction: CLIP2.016793_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.016793
Chromosome:chromosome 16
Location:798892
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g801882 (1 of 13) IPR000086//IPR015797 - NUDIX hydrolase domain // NUDIX hydrolase domain-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCGTGCGGAGTGCAAGCGGGCGCCTCCAAGTCGATGGGCGGACCAGGT
Internal bar code:AGGTAGACATCCGTTGAATACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1227
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TTCATGCCATTGGGTAGCGT
Suggested primer 2:ACTGACGTCCGACTTGACAC