Insertion junction: CLIP2.016800_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.016800
Chromosome:chromosome 3
Location:6504040
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g193850 SUCLG1,SCLA1,TEF25,SCL1 (1 of 1) K01899 - succinyl-CoA synthetase alpha subunit (LSC1); Succinyl-CoA ligase alpha chain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAACGCATTGTAACCACCCGACCCCGTGCGGCGCCATCCCGTATACACAC
Internal bar code:GCGTTCCGTGTGAGGAGGAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1963
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GACTCTCGACTCCGCATCAG
Suggested primer 2:AATGGGGACTTCATGCCTGG