Insertion junction: CLIP2.016801_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.016801
Chromosome:chromosome 16
Location:1149068
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g650151 SPAST1 (1 of 2) PF05496//PF09336 - Holliday junction DNA helicase ruvB N-terminus (RuvB_N) // Vps4 C terminal oligomerisation domain (Vps4_C); Spastin homologue CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATAGCATGATGGGCGCAAGAGGTAAGGGGAGAGGGGGAAGGGTAGGAA
Internal bar code:GATGGTTCACAATCTTTGTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:114
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGGAGGCGTTCATTGTCTGA
Suggested primer 2:GGCCAAGACGACCTTCTTCA