Insertion junction: CLIP2.016802_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.016802
Chromosome:chromosome 5
Location:479883
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g244050 Chlamydomonas specific protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCCACGCGCTTGGCCTCAGCACGGGCGGCGGCGGTAGCCTCCGCCTCC
Internal bar code:GAAATTCTAAGGGTGCCTACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:6026
LEAP-Seq percent confirming:15.1515
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCTGCCCTGAAGGAGG
Suggested primer 2:CTTCACCTCAGCCTCACGC