Insertion junction: CLIP2.016811_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.016811
Chromosome:chromosome 1
Location:5944937
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g042300 SRR6 (1 of 1) IPR001190//IPR009003//IPR017448 - SRCR domain // Peptidase S1, PA clan // SRCR-like domain; Scavenger receptor cysteine rich (SRCR) protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGTTACGTATTGACTCTCCCGTCCGCTGGCCGCATTCCTCGTGTGCGCT
Internal bar code:AAATGGCAGTTTGAGGAGCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1343
LEAP-Seq percent confirming:92.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGTTGTCGAAGTCCCACA
Suggested primer 2:CACGCCATTACAGCACGATG