Insertion junction: CLIP2.016821_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.016821
Chromosome:chromosome 7
Location:5314706
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g349950 (1 of 1) K03131 - transcription initiation factor TFIID subunit 6 (TAF6) 5'UTR
Cre07.g349966 (1 of 8) 2.3.1.75 - Long-chain-alcohol O-fatty-acyltransferase / Wax synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACATGGTGGCTCCTACCGTCTTCCTCTGCCAAGTTCTCCTGCCCTCTCT
Internal bar code:ATAGGTGCTGAGAATGGAGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2380
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCACAGACTTCGCACAGA
Suggested primer 2:CACCGCCGTCATCTACCTAC