Insertion junction: CLIP2.016826_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.016826
Chromosome:chromosome 3
Location:5082442
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g180200 (1 of 12) IPR001680//IPR015943//IPR017986 - WD40 repeat // WD40/YVTN repeat-like-containing domain // WD40-repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGCAATAAACAGCACTTGCGGAGAAATGTCTTCCCAGGATGCATTCCA
Internal bar code:AAGTCTTAGGCTGGTAGTGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1433
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGTCTGAAGTCGGTCGTA
Suggested primer 2:GCGAGGATTCCGGATTTTGC