Insertion junction: CLIP2.016846_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.016846
Chromosome:chromosome 17
Location:3282117
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g722050 (1 of 1) K19202 - histone deacetylase complex subunit SAP30 (SAP30) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCATTGTTCATCGTCGAACGGCTGCCTTCGTCAGAAAGCGATATTATCA
Internal bar code:TAAGTCGGGACCTCCAGGATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2123
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCTGACACCGGTTGTTG
Suggested primer 2:ACTGATGTGGCTGGTGAAGG