Insertion junction: CLIP2.016849_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.016849
Chromosome:chromosome 5
Location:245371
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g243150 Carbonic anhydrase-related protein; (1 of 1) PF04357 - Family of unknown function (DUF490) (DUF490) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAAAATGGCCACACGGATCTCCCGCCACCACCACCACCCCCAACACCA
Internal bar code:CACAAAATCTCTGTAAATTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:100
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GGGAGTCTACGTGCCATCAC
Suggested primer 2:AAACCAACGAAAACGAGCGG