Insertion junction: CLIP2.016853_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.016853
Chromosome:chromosome 10
Location:207964
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g419100 Hypothetical protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTTGAAGTGGTTGAAGTCGTGCGGACGCGATGATACTACGCATGCAGG
Internal bar code:CATAGGGGAGGTCAGCGATGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1273
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTAAGTGGGCGTGTGGTACA
Suggested primer 2:TATCCACGGCTCGCTGTAAC