Insertion junction: CLIP2.016862_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.016862
Chromosome:chromosome 2
Location:4958875
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g110350 (1 of 18) PTHR10774 - EXTENDED SYNAPTOTAGMIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGATGGCGGCAAGAACCCGGTAAGCATGGGCTTGAGGCCGTCAAGGCC
Internal bar code:AGTAAACGCCACAGGAAAGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:4107
LEAP-Seq percent confirming:98.5714
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:CAATGATGTCGTCAGCGCTG
Suggested primer 2:TGGCTGTGACTGTGGAGTTC