Insertion junction: CLIP2.016862_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.016862
Chromosome:chromosome 6
Location:6198078
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g292100 (1 of 1) PTHR30222//PTHR30222:SF3 - SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGTTGCGTGGGCACAAAGTCGAGGGGTGCCAGTGACGTTACGTAATAC
Internal bar code:GGTAATACGCGGTAATGAAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2285
LEAP-Seq percent confirming:76.4706
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTGGCGACCTTCACTTCC
Suggested primer 2:GAGCCCACCAACGAACTGTA