Insertion junction: CLIP2.016869_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.016869
Chromosome:chromosome 4
Location:1320082
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre04.g214650 BGS5,GSL1,GTR19 Glucan synthase-like 1; (1 of 7) 2.4.1.34 - 1,3-beta-glucan synthase / UDP-glucose-1,3-beta-D-glucan glucosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACCTGCTTTCCGTCGTCGTCCCTCAGCGCCGCCAACTCGCCGCGGTGC
Internal bar code:AAAAGAGTGGCGTATAAACGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:844
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGCCTAGTGCCTCGGTAA
Suggested primer 2:ATTTTGCATGCCCGTGACAC