Insertion junction: CLIP2.016872_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.016872
Chromosome:chromosome 1
Location:5097124
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g035550 (1 of 1) IPR000210//IPR006502 - BTB/POZ domain // Protein of unknown function PDDEXK-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCACCAATTAACTCGCGCATGCGGCATGCCCTCTATCCCCTGCTGCTGA
Internal bar code:TCAATCTCTTGACGACACACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2968
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGACGACATGGTACGTAC
Suggested primer 2:TCGCTCTCACAACACAGCAT