Insertion junction: CLIP2.016876_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.016876
Chromosome:chromosome 11
Location:1556322
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g468383 (1 of 1) PTHR22844//PTHR22844:SF176 - F-BOX AND WD40 DOMAIN PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCCGAACCGCGTGTAGGCAAAGCACGTGTGGGCACGTGGATGTGCCGG
Internal bar code:GGAGCTGCTGTGACCTGTAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:220
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGACGGGGAGGAAGGTCT
Suggested primer 2:TGCGCAATCTGTAAGGCTGA